readepi: Read Data from Relational Database Management Systems and Health Information Systems
Import Data from Relational Database Management Systems (RDBMS) and Health Information Systems ('HIS'). The current version of the package supports importing data from RDBMS including 'MS SQL', 'MySQL', 'PostGRESQL', and 'SQLite', as well as from two HIS platforms: 'DHIS2' and 'SORMAS'.
| Version: | 1.0.1 |
| Depends: | R (≥ 4.1.0) |
| Imports: | checkmate, cli, DBI, dplyr, httr2, odbc, pool, purrr, RMySQL, RSQLite, tidyr |
| Suggests: | cyclocomp, DiagrammeR, httptest, kableExtra, knitr, rmarkdown, testthat (≥ 3.0.0) |
| Published: | 2025-10-01 |
| DOI: | 10.32614/CRAN.package.readepi |
| Author: | Karim Mané  [aut,
cre, cph],
Emmanuel Kabuga
[ctb],
Bubacarr Bah
[ctb],
Bankolé Ahadzie [ctb],
Nuredin Mohammed [ctb],
Abdoelnaser Degoot [ctb],
Hugo Gruson [rev],
Pratik Gupte
[rev],
Andree Valle-Campos
[rev],
London School of Hygiene and Tropical Medicine, LSHTM [cph],
data.org [fnd] |
| Maintainer: | Karim Mané <karim.mane at lshtm.ac.uk> |
| BugReports: | https://github.com/epiverse-trace/readepi/issues |
| License: | MIT + file LICENSE |
| URL: | https://epiverse-trace.github.io/readepi/, https://github.com/epiverse-trace/readepi/, https://github.com/epiverse-trace/readepi |
| NeedsCompilation: | no |
| SystemRequirements: | odbc, libmariadbclient-dev |
| Citation: | readepi citation info |
| Materials: | README, NEWS |
| CRAN checks: | readepi results [issues need fixing before 2025-11-06] |
Documentation:
| Reference manual: | readepi.html , readepi.pdf |
| Vignettes: |
Package Design vignette for {readepi} (source, R code) install_drivers (source, R code) query_parameters (source, R code) readepi: Reading data from health information systems (source, R code) |
Downloads:
| Package source: | readepi_1.0.1.tar.gz |
| Windows binaries: | r-devel: readepi_1.0.1.zip, r-release: readepi_1.0.1.zip, r-oldrel: readepi_1.0.1.zip |
| macOS binaries: | r-release (arm64): readepi_1.0.1.tgz, r-oldrel (arm64): readepi_1.0.1.tgz, r-release (x86_64): readepi_1.0.1.tgz, r-oldrel (x86_64): readepi_1.0.1.tgz |
Linking:
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