Last updated on 2026-09-04 03:50:59 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.0 | 16.69 | 600.54 | 617.23 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.2 | 10.28 | 392.21 | 402.49 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.2.2 | 13.00 | 505.80 | 518.80 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.2.2 | 13.00 | 523.40 | 536.40 | OK | |
| r-devel-windows-x86_64 | 0.2.0 | 25.00 | 758.00 | 783.00 | ERROR | |
| r-patched-linux-x86_64 | 0.2.2 | 22.98 | 535.83 | 558.81 | OK | |
| r-release-linux-x86_64 | 0.2.0 | 16.48 | 560.49 | 576.97 | OK | |
| r-release-macos-arm64 | 0.2.2 | 5.00 | 145.00 | 150.00 | OK | |
| r-release-macos-x86_64 | 0.2.2 | 13.00 | 496.00 | 509.00 | OK | |
| r-release-windows-x86_64 | 0.2.2 | 29.00 | 763.00 | 792.00 | OK | |
| r-oldrel-macos-arm64 | 0.2.2 | 4.00 | 162.00 | 166.00 | OK | |
| r-oldrel-macos-x86_64 | 0.2.2 | 13.00 | 549.00 | 562.00 | OK | |
| r-oldrel-windows-x86_64 | 0.2.2 | 28.00 | 625.00 | 653.00 | OK |
Version: 0.2.0
Check: tests
Result: ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [332s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(xpose.xtras)
ℹ xpose is not currently attached.
Attaching package: 'xpose.xtras'
The following object is masked from 'package:stats':
filter
>
> test_check("xpose.xtras")
Using data from $prob no.1
Filtering data by EVID == 0
Returning parameter estimates from $prob no.1, subprob no.1, method foce
Returning data from run001.cor, $prob no.1, subprob no.1, method foce
Returning data from run001.cor, $prob no.1, subprob no.1, method foce
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
i For nlmixr2 models, sometimes '@file' is a better `axis.text`, instead of '@run'.
Saving _problems/test-covariates-6.R
Saving _problems/test-covariates-242.R
Saving _problems/test-covariates-285.R
Saving _problems/test-covariates-290.R
Saving _problems/test-covariates-295.R
Saving _problems/test-covariates-300.R
Saving _problems/test-covariates-325.R
Saving _problems/test-covariates-329.R
Saving _problems/test-covariates-333.R
Using data from $prob no.1
Removing duplicated rows based on: ID
Tidying data by ID, DOSE, AMT, SS, II ... and 23 more variables
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
Using data from $prob no.1
Filtering data by EVID == 0
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
Added `process_preset()`("2")
Added `process_preset()`("1")
Added `process_preset()`("2")
Added `process_preset()`("convert")
Added `process_preset()`("convert")
Added `process_preset()`("convert")
Added `process_preset()`("describe")
Added `process_preset()`("convert")
Added `process_preset()`("convert")
Added `process_preset()`("drop_eta5")
* "drop_eta5": `~.x %>% as_xpdb_x() %>% set_var_types(na = "ETA5")`
Added `process_preset()`("convert")
Added `process_preset()`("convert2")
Removed `process_preset()`("convert2")
Added `process_preset()`("convert")
Added `process_preset()`("describe")
Added `process_preset()`("describe")
Added `process_preset()`("convert")
Added `process_preset()`("convert")
Added `process_preset()`("convert")
i About to update the process-preset block in 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a4fbf152f':
# >>> xpose.xtras process presets (auto-generated by
add_process_preset()/persist=TRUE; do not edit by hand) >>>
xpose.xtras::add_process_preset(~.x %>% as_xpdb_x(), name = "convert",
overwrite = TRUE)
# <<< xpose.xtras process presets <<<
Added `process_preset()`("convert")
i About to update the process-preset block in 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a4685d716':
# >>> xpose.xtras process presets (auto-generated by
add_process_preset()/persist=TRUE; do not edit by hand) >>>
xpose.xtras::add_process_preset(~.x %>% as_xpdb_x(), name = "convert",
overwrite = TRUE)
# <<< xpose.xtras process presets <<<
Process presets written to 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a4685d716'
Removed `process_preset()`("convert")
Process presets written to 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a4685d716'
Added `process_preset()`("convert")
Process presets written to 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a44d81138f'
Added `process_preset()`("convert")
i About to update the process-preset block in 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a4209a586b':
# >>> xpose.xtras process presets (auto-generated by
add_process_preset()/persist=TRUE; do not edit by hand) >>>
xpose.xtras::add_process_preset(~.x %>% as_xpdb_x(), name = "convert",
overwrite = TRUE)
# <<< xpose.xtras process presets <<<
Process presets written to 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a4209a586b'
Added `process_preset()`("convert")
i About to update the process-preset block in 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a4209a586b':
# >>> xpose.xtras process presets (auto-generated by
add_process_preset()/persist=TRUE; do not edit by hand) >>>
xpose.xtras::add_process_preset(~.x, name = "convert", overwrite = TRUE)
# <<< xpose.xtras process presets <<<
Process presets written to 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a4209a586b'
Removed `process_preset()`("convert")
i About to update the process-preset block in 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a4209a586b':
Process presets written to 'D:\temp\2026_09_01_01_50_00_22259\RtmpwHmKqy\file206a4209a586b'
..
Using data from $prob no.1
Using data from $prob no.1
Saving _problems/test-xplot_pairs-14.R
Saving _problems/test-xplot_pairs-160.R
Saving _problems/test-xplot_pairs-161.R
Saving _problems/test-xplot_pairs-194.R
Saving _problems/test-xplot_pairs-216.R
Saving _problems/test-xplot_pairs-236.R
NULL
Saving _problems/test-xplot_pairs-257.R
Saving _problems/test-xplot_pairs-260.R
Saving _problems/test-xplot_pairs-272.R
NULL
Saving _problems/test-xplot_pairs-290.R
Saving _problems/test-xplot_pairs-291.R
Saving _problems/test-xplot_pairs-307.R
NULL
...............
...............
..
...
..
..
..
...
..
.
Using data from $prob no.1
Filtering data by EVID == 0
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
Using data from $prob no.1
Filtering data by EVID == 0
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
Using data from $prob no.1
Filtering data by EVID == 0
`geom_smooth()` using formula = 'y ~ x'
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
# A tibble: 3 x 10
param covariate covtype level value is_ref effect ci_low ci_high ci_method
<chr> <chr> <chr> <chr> <chr> <lgl> <dbl> <dbl> <dbl> <chr>
1 TVCL CLCR cont low 40 FALSE 0.997 0.995 0.998 simulation
2 TVCL CLCR cont ref 64 TRUE 1 1 1 simulation
3 TVCL CLCR cont high 102 FALSE 1.00 1.00 1.00 simulation
# A tibble: 0 x 10
# i 10 variables: param <chr>, covariate <chr>, covtype <chr>, level <chr>,
# value <chr>, is_ref <lgl>, effect <dbl>, ci_low <dbl>, ci_high <dbl>,
# ci_method <chr>
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Removing duplicated rows based on: ID
Tidying data by ID, SEX, MED1, MED2, DOSE ... and 23 more variables
Using data from $prob no.1
Removing duplicated rows based on: ID
Saving _problems/test-xtra_plot_all-2.R
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Removing duplicated rows based on: ID
Tidying data by ID, SEX, MED1, MED2, DOSE ... and 23 more variables
Using data from $prob no.1
Removing duplicated rows based on: ID
Saving _problems/test-xtra_plot_all-14.R
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Removing duplicated rows based on: ID
Tidying data by ID, SEX, MED1, MED2, DOSE ... and 23 more variables
! 1 of 3 plot(s) failed and was skipped: "stop"
Using data from $prob no.1
Filtering data by EVID == 0
.Using data from $prob no.1
Filtering data by EVID == 0
.Using data from $prob no.1
Removing duplicated rows based on: ID
Tidying data by ID, SEX, MED1, MED2, DOSE ... and 23 more variables
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Removing duplicated rows based on: ID
Tidying data by ID, SEX, MED1, MED2, DOSE ... and 23 more variables
Using data from $prob no.1
Filtering data by EVID == 0
Saving _problems/test-xtra_plots-97.R
Using data from $prob no.1
Filtering data by EVID == 0
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
`geom_smooth()` using formula = 'y ~ x'
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
Using data from $prob no.1
Filtering data by EVID == 0
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
`geom_smooth()` using formula = 'y ~ x'
i xpose is not currently attached.
i xpose is not currently attached.
[ FAIL 24 | WARN 0 | SKIP 48 | PASS 1378 ]
══ Skipped tests (48) ══════════════════════════════════════════════════════════
• On CRAN (38): 'test-colinearity.R:82:3', 'test-colinearity.R:115:3',
'test-colinearity.R:232:3', 'test-diag_constants.R:227:3',
'test-diag_constants.R:241:3', 'test-fixes.R:497:3',
'test-modavg_xpdb.R:2:3', 'test-nlmixr2.R:60:3', 'test-nlmixr2.R:102:3',
'test-nlmixr2.R:135:3', 'test-nlmixr2.R:181:3', 'test-nlmixr2.R:447:3',
'test-nlmixr2.R:483:3', 'test-nlmixr2.R:505:3', 'test-nlmixr2.R:529:3',
'test-nlmixr2.R:548:3', 'test-nlmixr2.R:567:3', 'test-nlmixr2.R:586:3',
'test-nlmixr2.R:605:3', 'test-utils.R:402:5', 'test-xplot_boxplot.R:181:3',
'test-xplot_pairs.R:165:3', 'test-xplot_pairs.R:320:3',
'test-xplot_rocplot.R:36:3', 'test-xplot_rocplot.R:131:3',
'test-xset_features.R:192:3', 'test-xset_features.R:192:3',
'test-xset_features.R:192:3', 'test-xset_features.R:192:3',
'test-xset_plots.R:220:3', 'test-xset_plots.R:490:3',
'test-xset_plots.R:553:3', 'test-xset_shark.R:2:3',
'test-xset_waterfall.R:2:3', 'test-zzz.R:48:7', 'test-zzz.R:48:7',
'test-zzz.R:48:7', 'test-zzz.R:48:7'
• requireNamespace("rxode2", quietly = TRUE) && "rxDerived" %in%
getNamespaceExports("rxode2") is TRUE (2): 'test-diag_constants.R:188:3',
'test-diag_constants.R:194:3'
• {bbr} is not installed (7): 'test-bbr.R:2:3', 'test-bbr.R:13:3',
'test-bbr.R:23:3', 'test-bbr.R:32:3', 'test-bbr.R:41:3', 'test-bbr.R:48:3',
'test-bbr.R:57:3'
• {qs} is not installed (1): 'test-nlmixr2.R:624:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-covariates.R:6:3'): grid plots appear as expected ──────────────
Error: object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. ├─xpdb_ex_pk %>% eta_grid(quiet = TRUE) at test-covariates.R:6:3
2. ├─xpose.xtras::eta_grid(., quiet = TRUE)
3. │ └─xpose.xtras::xplot_pairs(...)
4. └─base::loadNamespace(x)
5. └─base::namespaceImportFrom(...)
6. └─base::importIntoEnv(impenv, impnames, ns, impvars)
── Error ('test-covariates.R:239:3'): errors and special plot circumstances are correctly caught ──
Error: object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. ├─base::suppressMessages(...) at test-covariates.R:239:3
2. │ └─base::withCallingHandlers(...)
3. ├─testthat::expect_message(xpose::xpdb_ex_pk %>% cov_grid(), "Cannot show N")
4. │ └─testthat:::expect_condition_matching_(...)
5. │ └─testthat:::quasi_capture(...)
6. │ ├─testthat (local) .capture(...)
7. │ │ └─base::withCallingHandlers(...)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. ├─xpose::xpdb_ex_pk %>% cov_grid()
10. ├─xpose.xtras::cov_grid(.)
11. │ └─xpose.xtras::xplot_pairs(...)
12. └─base::loadNamespace(x)
13. └─base::namespaceImportFrom(...)
14. └─base::importIntoEnv(impenv, impnames, ns, impvars)
── Failure ('test-covariates.R:281:3'): no cov and no eta cases ────────────────
Expected `xpdb_x_nocov %>% set_var_types(catcov = SEX) %>% eta_vs_cov_grid(covtypes = "cat")` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. ├─base::suppressMessages(...) at test-covariates.R:281:3
2. │ └─base::withCallingHandlers(...)
3. └─testthat::expect_no_error(...)
── Failure ('test-covariates.R:286:3'): no cov and no eta cases ────────────────
Expected `xpdb_x_nocov %>% set_var_types(catcov = SEX) %>% eta_vs_cov_grid()` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. ├─base::suppressMessages(...) at test-covariates.R:286:3
2. │ └─base::withCallingHandlers(...)
3. └─testthat::expect_no_error(...)
── Failure ('test-covariates.R:291:3'): no cov and no eta cases ────────────────
Expected `xpdb_x_nocov %>% set_var_types(contcov = AGE) %>% eta_vs_cov_grid(covtypes = "cont")` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. ├─base::suppressMessages(...) at test-covariates.R:291:3
2. │ └─base::withCallingHandlers(...)
3. └─testthat::expect_no_error(...)
── Failure ('test-covariates.R:296:3'): no cov and no eta cases ────────────────
Expected `xpdb_x_nocov %>% set_var_types(contcov = AGE) %>% eta_vs_cov_grid()` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. ├─base::suppressMessages(...) at test-covariates.R:296:3
2. │ └─base::withCallingHandlers(...)
3. └─testthat::expect_no_error(...)
── Failure ('test-covariates.R:322:3'): pairs_opts named entries are forwarded to xplot_pairs (grid plots) ──
Expected `eta_grid(...)` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
── Failure ('test-covariates.R:326:3'): pairs_opts named entries are forwarded to xplot_pairs (grid plots) ──
Expected `cov_grid(...)` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
── Failure ('test-covariates.R:330:3'): pairs_opts named entries are forwarded to xplot_pairs (grid plots) ──
Expected `eta_vs_cov_grid(...)` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
── Error ('test-xplot_pairs.R:14:3'): xplot_pairs ──────────────────────────────
Error: object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. ├─xpdb_ex_pk %>% xplot_pairs(opt = opt_xp, quiet = TRUE) at test-xplot_pairs.R:14:3
2. ├─xpose.xtras::xplot_pairs(., opt = opt_xp, quiet = TRUE)
3. └─base::loadNamespace(x)
4. └─base::namespaceImportFrom(...)
5. └─base::importIntoEnv(impenv, impnames, ns, impvars)
── Failure ('test-xplot_pairs.R:160:3'): xplot_pairs falls back to xpose::data_opt() when opt is missing ──
Expected `xplot_pairs(xpdb_small, quiet = TRUE)` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
── Failure ('test-xplot_pairs.R:161:3'): xplot_pairs falls back to xpose::data_opt() when opt is missing ──
Expected `p` to be an S3 object.
Actual OO type: none.
── Error ('test-xplot_pairs.R:194:3'): xplot_pairs renders with a valid contcont_opts$other_fun ──
Error: object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. └─base::loadNamespace(x) at test-xplot_pairs.R:194:3
2. └─base::namespaceImportFrom(...)
3. └─base::importIntoEnv(impenv, impnames, ns, impvars)
── Error ('test-xplot_pairs.R:214:3'): xplot_pairs catcont_opts$other_fun is honored in the upper combo cell ──
Error: object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. └─base::loadNamespace(x) at test-xplot_pairs.R:214:3
2. └─base::namespaceImportFrom(...)
3. └─base::importIntoEnv(impenv, impnames, ns, impvars)
── Failure ('test-xplot_pairs.R:234:3'): xplot_pairs catcat_opts$use_rho = FALSE uses the count upper-panel and renders ──
Expected `xplot_pairs(xpdb_x, opt = opt_xtra, quiet = TRUE, catcat_opts = list(use_rho = FALSE))` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
── Failure ('test-xplot_pairs.R:255:3'): xplot_pairs strips a NULL other_fun default when contcont_opts/catcont_opts are partially specified ──
Expected `xplot_pairs(xpdb_x, opt = opt_xtra, quiet = TRUE, contcont_opts = list(stars = TRUE))` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
── Failure ('test-xplot_pairs.R:258:3'): xplot_pairs strips a NULL other_fun default when contcont_opts/catcont_opts are partially specified ──
Expected `xplot_pairs(xpdb_x, opt = opt_xtra, quiet = TRUE, catcont_opts = list(title = "rho"))` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
── Failure ('test-xplot_pairs.R:270:3'): xplot_pairs renders catcont_opts$stars = TRUE (rho_fun star annotation) ──
Expected `xplot_pairs(xpdb_x, opt = opt_xtra, quiet = TRUE, catcont_opts = list(stars = TRUE))` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
── Failure ('test-xplot_pairs.R:290:3'): xplot_pairs falls back to xp_theme$labeller when pairs_labeller is absent ──
Expected `xplot_pairs(xpdb_mod, opt = opt_xtra, quiet = TRUE)` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
── Failure ('test-xplot_pairs.R:291:3'): xplot_pairs falls back to xp_theme$labeller when pairs_labeller is absent ──
Expected `p` to be an S3 object.
Actual OO type: none.
── Failure ('test-xplot_pairs.R:307:3'): xplot_pairs wrapped_box hits both combo orientations depending on column order ──
Expected `xplot_pairs(xpdb_x, opt = opt_reordered, quiet = TRUE)` not to throw any errors.
Actually got a <simpleError> with message:
object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
── Error ('test-xtra_plot_all.R:2:3'): plot.xpose_data runs the built-in default spec and flattens/labels it ──
Error in `plot(xpdb_x, quiet = TRUE)`: Failed to generate the "eta_grid" plot (6 of 8).
i Set `force = TRUE` to skip failing plots and continue with the rest.
Caused by error:
! object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. ├─base::plot(xpdb_x, quiet = TRUE) at test-xtra_plot_all.R:2:3
2. ├─xpose.xtras:::plot.xpose_data(xpdb_x, quiet = TRUE)
3. │ ├─rlang::try_fetch(...)
4. │ │ ├─base::tryCatch(...)
5. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
6. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
7. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
8. │ │ └─base::withCallingHandlers(...)
9. │ └─xpose.xtras (local) fn(x)
10. │ └─xpose.xtras::eta_grid(.x)
11. │ └─xpose.xtras::xplot_pairs(...)
12. ├─base::loadNamespace(x)
13. │ └─base::namespaceImportFrom(...)
14. │ └─base::importIntoEnv(impenv, impnames, ns, impvars)
15. │ └─base::stop(...)
16. └─base::.handleSimpleError(...)
17. └─rlang (local) h(simpleError(msg, call))
18. └─handlers[[1L]](cnd)
19. └─cli::cli_abort(...)
20. └─rlang::abort(...)
── Error ('test-xtra_plot_all.R:14:3'): plot() dispatches to plot.xpose_data() through the base plot() generic ──
Error in `plot(xpdb_x, quiet = TRUE)`: Failed to generate the "eta_grid" plot (6 of 8).
i Set `force = TRUE` to skip failing plots and continue with the rest.
Caused by error:
! object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. ├─base::plot(xpdb_x, quiet = TRUE) at test-xtra_plot_all.R:14:3
2. ├─xpose.xtras:::plot.xpose_data(xpdb_x, quiet = TRUE)
3. │ ├─rlang::try_fetch(...)
4. │ │ ├─base::tryCatch(...)
5. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
6. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
7. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
8. │ │ └─base::withCallingHandlers(...)
9. │ └─xpose.xtras (local) fn(x)
10. │ └─xpose.xtras::eta_grid(.x)
11. │ └─xpose.xtras::xplot_pairs(...)
12. ├─base::loadNamespace(x)
13. │ └─base::namespaceImportFrom(...)
14. │ └─base::importIntoEnv(impenv, impnames, ns, impvars)
15. │ └─base::stop(...)
16. └─base::.handleSimpleError(...)
17. └─rlang (local) h(simpleError(msg, call))
18. └─handlers[[1L]](cnd)
19. └─cli::cli_abort(...)
20. └─rlang::abort(...)
── Error ('test-xtra_plots.R:97:3'): GGally wrapper works ──────────────────────
Error: object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
Backtrace:
▆
1. └─xpose.xtras::wrap_xp_ggally("count", xp_xtra_theme()) at test-xtra_plots.R:97:3
2. └─utils::getFromNamespace(paste0("ggally_", fn), "GGally")
3. └─base::asNamespace(ns)
4. └─base::getNamespace(ns)
5. ├─.Internal(getRegisteredNamespace(name)) %||% ...
6. └─base::loadNamespace(name)
7. └─base::namespaceImportFrom(...)
8. └─base::importIntoEnv(impenv, impnames, ns, impvars)
[ FAIL 24 | WARN 0 | SKIP 48 | PASS 1378 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 0.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'a01-the-xp_xtra-object.Rmd' using rmarkdown
--- finished re-building 'a01-the-xp_xtra-object.Rmd'
--- re-building 'a02-xpose-sets.Rmd' using rmarkdown
--- finished re-building 'a02-xpose-sets.Rmd'
--- re-building 'a03-useful_plots.Rmd' using rmarkdown
--- finished re-building 'a03-useful_plots.Rmd'
--- re-building 'a04-plot-output-and-options.Rmd' using rmarkdown
Quitting from a04-plot-output-and-options.Rmd:131-135 [plot_default]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `plot()`:
! Failed to generate the "eta_grid" plot (6 of 8).
ℹ Set `force = TRUE` to skip failing plots and continue with the rest.
Caused by error:
! object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
---
Backtrace:
▆
1. ├─base::plot(xpdb_x, quiet = TRUE)
2. ├─xpose.xtras:::plot.xpose_data(xpdb_x, quiet = TRUE)
3. │ ├─rlang::try_fetch(...)
4. │ │ ├─base::tryCatch(...)
5. │ │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
6. │ │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
7. │ │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
8. │ │ └─base::withCallingHandlers(...)
9. │ └─xpose.xtras (local) fn(x)
10. │ └─xpose.xtras::eta_grid(.x)
11. │ └─xpose.xtras::xplot_pairs(...)
12. └─base::loadNamespace(x)
13. └─base::namespaceImportFrom(...)
14. └─base::importIntoEnv(impenv, impnames, ns, impvars)
15. └─base::stop(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'a04-plot-output-and-options.Rmd' failed with diagnostics:
Failed to generate the "eta_grid" plot (6 of 8).
ℹ Set `force = TRUE` to skip failing plots and continue with the rest.
Caused by error:
! object 'ggcoef_multinom' is not exported by 'namespace:ggstats'
--- failed re-building 'a04-plot-output-and-options.Rmd'
SUMMARY: processing the following file failed:
'a04-plot-output-and-options.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64