CRAN Package Check Results for Package pathdb

Last updated on 2026-10-26 16:51:51 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.0 16.68 75.78 92.46 OK
r-devel-linux-x86_64-debian-gcc 0.1.0 13.08 57.73 70.81 OK
r-devel-linux-x86_64-fedora-clang 0.1.0 14.00 62.72 76.72 OK
r-devel-linux-x86_64-fedora-gcc 0.1.0 13.00 58.52 71.52 OK
r-devel-windows-x86_64 0.1.0 21.00 95.00 116.00 OK
r-patched-linux-x86_64 0.1.0 15.45 45.89 61.34 ERROR
r-release-linux-x86_64 0.1.0 16.13 65.29 81.42 OK
r-release-macos-arm64 0.1.0 6.00 33.00 39.00 OK
r-release-macos-x86_64 0.1.0 15.00 102.00 117.00 OK
r-release-windows-x86_64 0.1.0 19.00 84.00 103.00 OK
r-oldrel-macos-arm64 0.1.0 OK
r-oldrel-macos-x86_64 0.1.0 15.00 105.00 120.00 OK
r-oldrel-windows-x86_64 0.1.0 27.00 109.00 136.00 OK

Check Details

Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘data-access.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘data-access.Rmd’ --- re-building ‘path-enrichment.Rmd’ using rmarkdown Quitting from path-enrichment.Rmd:25-32 [setup] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `library()`: ! there is no package called 'clusterProfiler' --- Backtrace: ▆ 1. └─base::library(clusterProfiler) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'path-enrichment.Rmd' failed with diagnostics: there is no package called 'clusterProfiler' --- failed re-building ‘path-enrichment.Rmd’ SUMMARY: processing the following file failed: ‘path-enrichment.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64