Last updated on 2025-10-12 20:49:34 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.21 | 256.80 | 270.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.79 | 242.09 | 251.88 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.76 | 265.07 | 279.83 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 188.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 173.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/136s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.501, system: 0.048, elapsed: 1.936 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.876, system: 0.110, elapsed: 10.903 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.750, system: 0.229, elapsed: 4.850 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.222 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.007, system: 0.425, elapsed: 18.793 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.648, system: 0.077, elapsed: 2.349 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.217, system: 0.244, elapsed: 17.585 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.020, elapsed: 0.289 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.980, system: 0.285, elapsed: 6.146 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.009, elapsed: 0.321 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.737, system: 0.669, elapsed: 27.547 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.812, system: 0.092, elapsed: 2.933 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.264, system: 0.274, elapsed: 15.234 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.430 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.006, system: 0.278, elapsed: 11.152 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.011, elapsed: 0.538 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.261, system: 0.263, elapsed: 2.351 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.334, system: 0.965, elapsed: 33.992 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.622, system: 0.074, elapsed: 4.181 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.153, system: 0.200, elapsed: 18.100 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.013, elapsed: 0.406 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.814, system: 0.189, elapsed: 6.472 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.265 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.272, system: 0.508, elapsed: 17.784 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.872, system: 1.024, elapsed: 48.560 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/113s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.540, system: 0.047, elapsed: 2.179 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.901, system: 0.108, elapsed: 11.388 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.014, elapsed: 0.240 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.637, system: 0.229, elapsed: 5.105 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.006, elapsed: 0.194 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.975, system: 0.431, elapsed: 19.748 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.546, system: 0.047, elapsed: 1.879 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.857, system: 0.176, elapsed: 10.537 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.018, elapsed: 0.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.768, system: 0.252, elapsed: 4.617 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.010, elapsed: 0.210 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.060, system: 0.546, elapsed: 18.137 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.675, system: 0.072, elapsed: 2.298 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.073, system: 0.253, elapsed: 12.048 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.016, elapsed: 0.228 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.631, system: 0.222, elapsed: 5.406 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.016, elapsed: 0.529 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.048, system: 0.231, elapsed: 1.531 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.413, system: 0.849, elapsed: 23.025 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.556, system: 0.049, elapsed: 3.741 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.028, system: 0.159, elapsed: 12.996 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.708, system: 0.252, elapsed: 5.825 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.009, elapsed: 0.314 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.241, system: 0.678, elapsed: 20.740 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.512, system: 1.191, elapsed: 45.098 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64