Last updated on 2026-07-02 01:55:05 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.10.0 | 5.87 | 141.35 | 147.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.10.0 | 4.77 | 98.89 | 103.66 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.10.0 | 11.00 | 391.49 | 402.49 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.10.0 | 11.00 | 412.29 | 423.29 | OK | |
| r-devel-windows-x86_64 | 2.10.0 | 11.00 | 142.00 | 153.00 | OK | |
| r-patched-linux-x86_64 | 2.10.0 | 8.08 | 134.21 | 142.29 | OK | |
| r-release-linux-x86_64 | 2.10.0 | OK | ||||
| r-release-macos-arm64 | 2.10.0 | 2.00 | 33.00 | 35.00 | OK | |
| r-release-macos-x86_64 | 2.10.0 | 5.00 | 165.00 | 170.00 | OK | |
| r-release-windows-x86_64 | 2.10.0 | 11.00 | 148.00 | 159.00 | OK | |
| r-oldrel-macos-arm64 | 2.10.0 | 1.00 | 38.00 | 39.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.10.0 | 5.00 | 133.00 | 138.00 | OK | |
| r-oldrel-windows-x86_64 | 2.10.0 | 15.00 | 172.00 | 187.00 | OK |
Version: 2.10.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(loo)
This is loo version 2.10.0
- Online documentation and vignettes at mc-stan.org/loo
- As of v2.0.0 loo defaults to 1 core but we recommend using as many as possible. Use the 'cores' argument or set options(mc.cores = NUM_CORES) for an entire session.
> library(testthat)
Attaching package: 'testthat'
The following object is masked from 'package:loo':
compare
> Sys.setenv("R_TESTS" = "")
> test_check("loo")
Starting 2 test processes.
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: 1: outer(X, Y)outer(X, Y)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 2: 2: -theta %o% x-theta %o% x
> test_loo_and_waic.R:
> test_loo_and_waic.R: 3: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 4: 4: psis_smooth_tail(lw_tail, cutoff)psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 5: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R:
> test_loo_and_waic.R: 6: 6: FUN(X[[i]], ...)FUN(X[[i]], ...)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 7: 7: lapply(X = S, FUN = FUN, ...)lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 8: 8: doTryCatch(return(expr), name, parentenv, handler)doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 9: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) sm <- strsplit(conditionMessage(e), "\n")[[1L]] if (!is.null(call)) { w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) if (identical(call[[1L]], quote(doTryCatch))) prefix <- paste0(prefix, "\n ") call <- sys.call(-4L) } dcall <- deparse(call, nlines = 1L) else prefix <- "Error : " prefix <- paste("Error in", dcall, ": ") msg <- paste0(prefix, conditionMessage(e), "\n") LONG <- 75L .Internal(seterrmessage(msg[1L])) sm <- strsplit(conditionMessage(e), "\n")[[1L]] if (!silent && isTRUE(getOption("show.error.messages"))) { w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") cat(msg, file = outFile) if (is.na(w)) .Internal(printDeferredWarnings()) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], } type = "b") invisible(structure(msg, class = "try-error", condition = e)) if (w > LONG) }) prefix <- paste0(prefix, "\n ")
> test_loo_and_waic.R: }12: else prefix <- "Error : "try(lapply(X = S, FUN = FUN, ...), silent = TRUE) msg <- paste0(prefix, conditionMessage(e), "\n")
> test_loo_and_waic.R: .Internal(seterrmessage(msg[1L]))13: if (!silent && isTRUE(getOption("show.error.messages"))) {sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) cat(msg, file = outFile)
> test_loo_and_waic.R: .Internal(printDeferredWarnings())14: }FUN(X[[i]], ...) invisible(structure(msg, class = "try-error", condition = e))
> test_loo_and_waic.R: })
> test_loo_and_waic.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_and_waic.R: 15: 13: lapply(seq_len(cores), inner.do)sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 14: FUN(X[[i]], ...)
> test_loo_and_waic.R: 15: lapply(seq_len(cores), inner.do)18: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, method = is_method)
> test_loo_and_waic.R: 19:
> test_loo_and_waic.R: loo.array(LLarr, r_eff = r_eff_arr, cores = 2)16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R:
> test_loo_and_waic.R: 17: 20: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 21: withCallingHandlers(expr, warning = function(w) if (inherits(w, classes)) tryInvokeRestart("muffleWarning")) method = method)
> test_loo_and_waic.R: 18: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, method = is_method)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 22: 19: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 23: 20: eval(code, test_env)loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 24: 21: eval(code, test_env)withCallingHandlers(expr, warning = function(w) if (inherits(w,
> test_loo_and_waic.R: classes)) tryInvokeRestart("muffleWarning"))25:
> test_loo_and_waic.R: withCallingHandlers({22: eval(code, test_env)suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) new_expectations <- the$test_expectations > starting_expectations
> test_loo_and_waic.R: if (snapshot_skipped) {23: skip("On CRAN")eval(code, test_env) }
> test_loo_and_waic.R: else if (!new_expectations && skip_on_empty) {24: skip_empty()eval(code, test_env) }
> test_loo_and_waic.R: }, expectation = handle_expectation, packageNotFoundError = function(e) {25: if (on_cran()) {withCallingHandlers({ skip(paste0("{", e$package, "} is not installed.")) eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations}, snapshot_on_cran = function(cnd) { if (snapshot_skipped) { snapshot_skipped <<- TRUE skip("On CRAN") invokeRestart("muffle_cran_snapshot") }}, skip = handle_skip, warning = handle_warning, message = handle_message, else if (!new_expectations && skip_on_empty) { error = handle_error, interrupt = handle_interrupt) skip_empty()
> test_loo_and_waic.R: 26: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: }tryCatchOne(expr, names, parentenv, handlers[[1L]])}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {
> test_loo_and_waic.R: skip(paste0("{", e$package, "} is not installed."))
> test_loo_and_waic.R: }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE28: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 29: invokeRestart("muffle_cran_snapshot")tryCatch(withCallingHandlers({}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 26: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: eval(code, test_env)28: new_expectations <- the$test_expectations > starting_expectationstryCatchList(expr, classes, parentenv, handlers) if (snapshot_skipped) {
> test_loo_and_waic.R: skip("On CRAN")29: }tryCatch(withCallingHandlers({ else if (!new_expectations && skip_on_empty) { eval(code, test_env) skip_empty() new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip("On CRAN") if (on_cran()) { } skip(paste0("{", e$package, "} is not installed.")) else if (!new_expectations && skip_on_empty) { } skip_empty()}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE}, expectation = handle_expectation, packageNotFoundError = function(e) { invokeRestart("muffle_cran_snapshot") if (on_cran()) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip(paste0("{", e$package, "} is not installed.")) error = handle_error, interrupt = handle_interrupt), error = handle_fatal) }
> test_loo_and_waic.R: }, snapshot_on_cran = function(cnd) {30: snapshot_skipped <<- TRUEdoWithOneRestart(return(expr), restart) invokeRestart("muffle_cran_snapshot")
> test_loo_and_waic.R: }, skip = handle_skip, warning = handle_warning, message = handle_message, 31: error = handle_error, interrupt = handle_interrupt), error = handle_fatal)withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R:
> test_loo_and_waic.R: 30: 32: doWithOneRestart(return(expr), restart)withRestarts(tryCatch(withCallingHandlers({
> test_loo_and_waic.R: eval(code, test_env)31: new_expectations <- the$test_expectations > starting_expectationswithOneRestart(expr, restarts[[1L]]) if (snapshot_skipped) { skip("On CRAN")
> test_loo_and_waic.R: 32: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations } else if (!new_expectations && skip_on_empty) { skip_empty() } if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE}, skip = handle_skip, warning = handle_warning, message = handle_message, invokeRestart("muffle_cran_snapshot") error = handle_error, interrupt = handle_interrupt), error = handle_fatal), }, skip = handle_skip, warning = handle_warning, message = handle_message, end_test = function() { error = handle_error, interrupt = handle_interrupt), error = handle_fatal), }) end_test = function() {
> test_loo_and_waic.R: })33:
> test_loo_and_waic.R: test_code(code, parent.frame())33:
> test_loo_and_waic.R: test_code(code, parent.frame())34: test_that("loo with cores=1 and cores=2 gives same results", { loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))
> test_loo_and_waic.R: expect_equal(loo1$estimates, loo2$estimates)34: })test_that("loo with cores=1 and cores=2 gives same results",
> test_loo_and_waic.R: {35: loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, eval(code, test_env) cores = 2))
> test_loo_and_waic.R: expect_equal(loo1$estimates, loo2$estimates)36: })eval(code, test_env)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 35: 37: eval(code, test_env)withCallingHandlers({
> test_loo_and_waic.R: eval(code, test_env)36: new_expectations <- the$test_expectations > starting_expectationseval(code, test_env) if (snapshot_skipped) {
> test_loo_and_waic.R: skip("On CRAN")37: }withCallingHandlers({ else if (!new_expectations && skip_on_empty) { eval(code, test_env) skip_empty() new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { } skip_empty()}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip(paste0("{", e$package, "} is not installed.")) if (on_cran()) { } skip(paste0("{", e$package, "} is not installed."))}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE}, snapshot_on_cran = function(cnd) { invokeRestart("muffle_cran_snapshot") snapshot_skipped <<- TRUE}, skip = handle_skip, warning = handle_warning, message = handle_message, invokeRestart("muffle_cran_snapshot") error = handle_error, interrupt = handle_interrupt)}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 38:
> test_loo_and_waic.R: 38: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 39: doTryCatch(return(expr), name, parentenv, handler)tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 39: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 41: tryCatch(withCallingHandlers({ eval(code, test_env)
> test_loo_and_waic.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 41: new_expectations <- the$test_expectations > starting_expectationstryCatch(withCallingHandlers({ if (snapshot_skipped) { eval(code, test_env) skip("On CRAN") new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) { else if (!new_expectations && skip_on_empty) { skip("On CRAN") skip_empty() } } else if (!new_expectations && skip_on_empty) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip_empty() if (on_cran()) { }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") skip(paste0("{", e$package, "} is not installed."))}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt), error = handle_fatal)}, snapshot_on_cran = function(cnd) {
> test_loo_and_waic.R: snapshot_skipped <<- TRUE42: invokeRestart("muffle_cran_snapshot")doWithOneRestart(return(expr), restart)}, skip = handle_skip, warning = handle_warning, message = handle_message,
> test_loo_and_waic.R: error = handle_error, interrupt = handle_interrupt), error = handle_fatal)43:
> test_loo_and_waic.R: withOneRestart(expr, restarts[[1L]])42:
> test_loo_and_waic.R: doWithOneRestart(return(expr), restart)44:
> test_loo_and_waic.R: withRestarts(tryCatch(withCallingHandlers({43: eval(code, test_env)withOneRestart(expr, restarts[[1L]]) new_expectations <- the$test_expectations > starting_expectations
> test_loo_and_waic.R: if (snapshot_skipped) {44: skip("On CRAN")withRestarts(tryCatch(withCallingHandlers({ } eval(code, test_env) else if (!new_expectations && skip_on_empty) { new_expectations <- the$test_expectations > starting_expectations skip_empty() if (snapshot_skipped) { } skip("On CRAN")}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) { else if (!new_expectations && skip_on_empty) { skip(paste0("{", e$package, "} is not installed.")) skip_empty() } }}, snapshot_on_cran = function(cnd) {}, expectation = handle_expectation, packageNotFoundError = function(e) { snapshot_skipped <<- TRUE if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {
> test_loo_and_waic.R: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 45: test_code(code = exprs, env = env, reporter = get_reporter() %||% }, skip = handle_skip, warning = handle_warning, message = handle_message, StopReporter$new()) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
> test_loo_and_waic.R: end_test = function() { })
> test_loo_and_waic.R: 45: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_and_waic.R: 47: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_and_waic.R: 47: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R: 48: doTryCatch(return(expr), name, parentenv, handler)test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 49: 48: tryCatchOne(expr, names, parentenv, handlers[[1L]])doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 51: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_and_waic.R: 52:
> test_loo_and_waic.R: 50: with_reporter(multi, test_one_file(path, env = the$testing_env, tryCatchList(expr, classes, parentenv, handlers) shuffle = shuffle))
> test_loo_and_waic.R:
> test_loo_and_waic.R: 51: 53: tryCatch(code, testthat_abort_reporter = function(cnd) {asNamespace("testthat")$queue_task(path, shuffle) cat(conditionMessage(cnd), "\n")
> test_loo_and_waic.R: 54: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) NULL{ asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395618126b03"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: })
> test_loo_and_waic.R: 52: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395618126b03"), with_reporter(multi, test_one_file(path, env = the$testing_env, base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, shuffle = shuffle)) quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d",
> test_loo_and_waic.R: compress = FALSE)53:
> test_loo_and_waic.R: asNamespace("testthat")$queue_task(path, shuffle)58:
> test_loo_and_waic.R: base::withCallingHandlers({54: {(function (path, shuffle) NULL{ NULL asNamespace("testthat")$queue_task(path, shuffle) }})(base::quote("test_loo_and_waic.R"), base::quote(FALSE)) base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395618126b03"),
> test_loo_and_waic.R: base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, 55: quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", (function (what, args, quote = FALSE, envir = parent.frame()) compress = FALSE){ base::flush(base::stdout()) if (!is.list(args)) base::flush(base::stderr()) stop("second argument must be a list") { if (quote) NULL args <- lapply(args, enquote) NULL .Internal(do.call(what, args, envir)) }})(base::quote(function (path, shuffle) base::invisible(){}, error = function(e) { asNamespace("testthat")$queue_task(path, shuffle) {}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395618126b03"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395618126b03"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { compress = FALSE) base::assign(".Traceback", base::.traceback(4), envir = callr_data)
> test_loo_and_waic.R: utils::dump.frames("__callr_dump__")58: base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::withCallingHandlers({ envir = callr_data) { base::rm("__callr_dump__", envir = .GlobalEnv) NULL } NULL e <- err$process_call(e) } e2 <- err$new_error("error in callr subprocess") base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395618126b03"), class <- base::class base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, class(e2) <- base::c("callr_remote_error", class(e2)) quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", e2 <- err$add_trace_back(e2) compress = FALSE) cut <- base::which(e2$trace$scope == "global")[1] base::flush(base::stdout()) if (!base::is.na(cut)) { base::flush(base::stderr()) e2$trace <- e2$trace[-(1:cut), ] { } NULL if (callr_data$has_otel) { NULL callr_data$otel_span$record_exception(e2) } } base::invisible() base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", }, error = function(e) { ".error")) { } callr_data <- base::as.environment("tools:callr")$`__callr_data__`}, interrupt = function(e) { err <- callr_data$err { if (FALSE) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::assign(".Traceback", base::.traceback(4), envir = callr_data) err <- callr_data$err utils::dump.frames("__callr_dump__") if (FALSE) { base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::assign(".Traceback", base::.traceback(4), envir = callr_data) envir = callr_data) utils::dump.frames("__callr_dump__") base::rm("__callr_dump__", envir = .GlobalEnv) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, } envir = callr_data) e <- err$process_call(e) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") e2 <- err$new_error("error in callr subprocess") class <- base::class class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) e2$trace <- e2$trace[-(1:cut), ] } } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", if (callr_data$has_otel) { ".error")) callr_data$otel_span$record_exception(e2) } }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__`
> test_loo_and_waic.R: base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") pxlib <- callr_data$pxlib if (base::is.null(e$code)) { base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, e$code <- "301" envir = callr_data) } base::rm("__callr_dump__", envir = .GlobalEnv) msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, } NULL))) e <- err$process_call(e) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", e2 <- err$new_error("error in callr subprocess") msg) class <- base::class if (callr_data$has_otel) { class(e2) <- base::c("callr_remote_error", class(e2)) callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) e2 <- err$add_trace_back(e2) } cut <- base::which(e2$trace$scope == "global")[1] pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { if (!base::is.na(cut)) { base::invokeRestart("muffleMessage") e2$trace <- e2$trace[-(1:cut), ] } } }) if (callr_data$has_otel) {}) callr_data$otel_span$record_exception(e2)
> test_loo_and_waic.R: }59: base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlibdoTryCatch(return(expr), name, parentenv, handler) if (base::is.null(e$code)) {
> test_loo_and_waic.R: e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data)60: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 61: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_and_waic.R: 62: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 63: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_and_waic.R: if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) {64: base::invokeRestart("muffleMessage")tryCatchList(expr, classes, parentenv, handlers) }
> test_loo_and_waic.R: })65: })base::tryCatch(base::withCallingHandlers({
> test_loo_and_waic.R: {59: NULLdoTryCatch(return(expr), name, parentenv, handler) NULL
> test_loo_and_waic.R: }60: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395618126b03"), tryCatchOne(expr, names, parentenv, handlers[[1L]]) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv,
> test_loo_and_waic.R: quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", 61: compress = FALSE)tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) base::flush(base::stdout())
> test_loo_and_waic.R: base::flush(base::stderr())62: {doTryCatch(return(expr), name, parentenv, handler) NULL
> test_loo_and_waic.R: NULL63: }tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), base::invisible() names[nh], parentenv, handlers[[nh]])}, error = function(e) {
> test_loo_and_waic.R: {64: callr_data <- base::as.environment("tools:callr")$`__callr_data__`tryCatchList(expr, classes, parentenv, handlers) err <- callr_data$err
> test_loo_and_waic.R: if (FALSE) {65: base::assign(".Traceback", base::.traceback(4), envir = callr_data)base::tryCatch(base::withCallingHandlers({ utils::dump.frames("__callr_dump__") { base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, NULL envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) NULL cut <- base::which(e2$trace$scope == "global")[1] } if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395618126b03"), callr_data$otel_span$record_exception(e2) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, } quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", NULL ".error")) NULL } }}, interrupt = function(e) { base::invisible() {}, error = function(e) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` { err <- callr_data$err callr_data <- base::as.environment("tools:callr")$`__callr_data__` if (FALSE) { err <- callr_data$err base::assign(".Traceback", base::.traceback(4), envir = callr_data) if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) utils::dump.frames("__callr_dump__") base::rm("__callr_dump__", envir = .GlobalEnv) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, } envir = callr_data) e <- err$process_call(e) base::rm("__callr_dump__", envir = .GlobalEnv) e2 <- err$new_error("error in callr subprocess") } class <- base::class e <- err$process_call(e) class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$new_error("error in callr subprocess") e2 <- err$add_trace_back(e2) class <- base::class cut <- base::which(e2$trace$scope == "global")[1] class(e2) <- base::c("callr_remote_error", class(e2)) if (!base::is.na(cut)) { e2 <- err$add_trace_back(e2) e2$trace <- e2$trace[-(1:cut), ] cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { } callr_data$otel_span$record_exception(e2) if (callr_data$has_otel) { } callr_data$otel_span$record_exception(e2) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", } ".error")) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", } ".error"))}, callr_message = function(e) { } base::try({}, interrupt = function(e) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` { pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301"
> test_loo_and_waic.R: callr_data <- base::as.environment("tools:callr")$`__callr_data__` } err <- callr_data$err if (FALSE) { msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) base::assign(".Traceback", base::.traceback(4), envir = callr_data) if (callr_data$has_otel) { utils::dump.frames("__callr_dump__") callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::invokeRestart("cli_message_handled") envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } }) class <- base::class}), error = function(e) { class(e2) <- base::c("callr_remote_error", class(e2)) { e2 <- err$add_trace_back(e2) NULL cut <- base::which(e2$trace$scope == "global")[1] NULL if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] if (FALSE) { } base::try(base::stop(e)) if (callr_data$has_otel) { } callr_data$otel_span$record_exception(e2) if (FALSE) { } base::q(save = "no", status = 1) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-13956612f9e4d", ".error")) }}, callr_message = function(e) { base::try({ } callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::invisible() pxlib <- callr_data$pxlib}, interrupt = function(e) { if (base::is.null(e$code)) { { e$code <- "301" NULL } NULL msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, } NULL))) if (FALSE) { data <- base::paste0(e$code, " ", base::nchar(msg), "\n", base::q(save = "no", status = 1) msg) } if (callr_data$has_otel) { base::invisible() callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code))}) }
> test_loo_and_waic.R: pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) {An irrecoverable exception occurred. R is aborting now ...
> test_loo_and_waic.R: base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_and_waic-30.R
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: outer(X, Y)
> test_loo_predictive_metric.R: 2: -theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 10: 1: outer(X, Y)
> test_loo_predictive_metric.R: 2: -theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: tryCatchList(expr, classes, parentenv, handlers) 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 11: 5: tryCatch(expr, error = function(e) {is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]) call <- conditionCall(e)
> test_loo_predictive_metric.R: if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler) LONG <- 75L
> test_loo_predictive_metric.R: sm <- strsplit(conditionMessage(e), "\n")[[1L]] 9: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (is.na(w))
> test_loo_predictive_metric.R: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 10: type = "b")tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: if (w > LONG) tryCatch(expr, error = function(e) { prefix <- paste0(prefix, "\n ") call <- conditionCall(e) } if (!is.null(call)) { else prefix <- "Error : " if (identical(call[[1L]], quote(doTryCatch))) msg <- paste0(prefix, conditionMessage(e), "\n") call <- sys.call(-4L) .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e)) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ")})
> test_loo_predictive_metric.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 13: } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: if (!silent && isTRUE(getOption("show.error.messages"))) {15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores,
> test_loo_predictive_metric.R: method = method)12:
> test_loo_predictive_metric.R: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)18:
> test_loo_predictive_metric.R: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, 13: method = "psis")sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 19: 14: psis.matrix(-LL, r_eff = r_eff, cores = 2)FUN(X[[i]], ...)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 20: 15: psis(-LL, r_eff = r_eff, cores = 2)lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 21: 16: eval(code, test_env)parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 22: 18: eval(code, test_env)importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores,
> test_loo_predictive_metric.R: method = "psis")23:
> test_loo_predictive_metric.R: withCallingHandlers({19: eval(code, test_env)psis.matrix(-LL, r_eff = r_eff, cores = 2) new_expectations <- the$test_expectations > starting_expectations
> test_loo_predictive_metric.R: if (snapshot_skipped) {20: skip("On CRAN")psis(-LL, r_eff = r_eff, cores = 2) }
> test_loo_predictive_metric.R: else if (!new_expectations && skip_on_empty) {21: skip_empty()eval(code, test_env) }
> test_loo_predictive_metric.R: }, expectation = handle_expectation, packageNotFoundError = function(e) {22: if (on_cran()) {eval(code, test_env) skip(paste0("{", e$package, "} is not installed."))
> test_loo_predictive_metric.R: }23: }, snapshot_on_cran = function(cnd) {withCallingHandlers({ snapshot_skipped <<- TRUE eval(code, test_env) invokeRestart("muffle_cran_snapshot") new_expectations <- the$test_expectations > starting_expectations}, skip = handle_skip, warning = handle_warning, message = handle_message, if (snapshot_skipped) { error = handle_error, interrupt = handle_interrupt) skip("On CRAN")
> test_loo_predictive_metric.R: }24: else if (!new_expectations && skip_on_empty) {doTryCatch(return(expr), name, parentenv, handler) skip_empty()
> test_loo_predictive_metric.R: }25: }, expectation = handle_expectation, packageNotFoundError = function(e) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (on_cran()) {
> test_loo_predictive_metric.R: skip(paste0("{", e$package, "} is not installed."))26: }tryCatchList(expr, classes, parentenv, handlers)}, snapshot_on_cran = function(cnd) {
> test_loo_predictive_metric.R: snapshot_skipped <<- TRUE27: invokeRestart("muffle_cran_snapshot")tryCatch(withCallingHandlers({}, skip = handle_skip, warning = handle_warning, message = handle_message, eval(code, test_env) error = handle_error, interrupt = handle_interrupt) new_expectations <- the$test_expectations > starting_expectations
> test_loo_predictive_metric.R: if (snapshot_skipped) {24: skip("On CRAN")doTryCatch(return(expr), name, parentenv, handler) }
> test_loo_predictive_metric.R: else if (!new_expectations && skip_on_empty) {25: skip_empty()tryCatchOne(expr, names, parentenv, handlers[[1L]]) }
> test_loo_predictive_metric.R: }, expectation = handle_expectation, packageNotFoundError = function(e) {26: if (on_cran()) {tryCatchList(expr, classes, parentenv, handlers) skip(paste0("{", e$package, "} is not installed."))
> test_loo_predictive_metric.R: }27: }, snapshot_on_cran = function(cnd) {tryCatch(withCallingHandlers({ snapshot_skipped <<- TRUE eval(code, test_env) invokeRestart("muffle_cran_snapshot") new_expectations <- the$test_expectations > starting_expectations}, skip = handle_skip, warning = handle_warning, message = handle_message, if (snapshot_skipped) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal) skip("On CRAN")
> test_loo_predictive_metric.R: }28: else if (!new_expectations && skip_on_empty) {doWithOneRestart(return(expr), restart) skip_empty()
> test_loo_predictive_metric.R: }29: }, expectation = handle_expectation, packageNotFoundError = function(e) {withOneRestart(expr, restarts[[1L]]) if (on_cran()) {
> test_loo_predictive_metric.R: skip(paste0("{", e$package, "} is not installed."))30: }withRestarts(tryCatch(withCallingHandlers({}, snapshot_on_cran = function(cnd) { eval(code, test_env) snapshot_skipped <<- TRUE new_expectations <- the$test_expectations > starting_expectations invokeRestart("muffle_cran_snapshot") if (snapshot_skipped) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip("On CRAN") error = handle_error, interrupt = handle_interrupt), error = handle_fatal) }
> test_loo_predictive_metric.R: else if (!new_expectations && skip_on_empty) {28: skip_empty()doWithOneRestart(return(expr), restart) }
> test_loo_predictive_metric.R: 29: withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 30: }, expectation = handle_expectation, packageNotFoundError = function(e) {withRestarts(tryCatch(withCallingHandlers({ if (on_cran()) { eval(code, test_env) skip(paste0("{", e$package, "} is not installed.")) new_expectations <- the$test_expectations > starting_expectations }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } })
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_predictive_metric.R: 32: }, expectation = handle_expectation, packageNotFoundError = function(e) {source_file(path, env = env(env), desc = desc, shuffle = shuffle, if (on_cran()) { error_call = error_call) skip(paste0("{", e$package, "} is not installed."))
> test_loo_predictive_metric.R: }33: }, snapshot_on_cran = function(cnd) {test_one_file(path, env = the$testing_env, shuffle = shuffle) snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 34: 31: doTryCatch(return(expr), name, parentenv, handler)test_code(code = exprs, env = env, reporter = get_reporter() %||%
> test_loo_predictive_metric.R: StopReporter$new())35:
> test_loo_predictive_metric.R: tryCatchOne(expr, names, parentenv, handlers[[1L]])32:
> test_loo_predictive_metric.R: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_predictive_metric.R: 33: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_predictive_metric.R: 34: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 35: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 36: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_predictive_metric.R: 38: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_predictive_metric.R: 36: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL39: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: 40: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})
> test_loo_predictive_metric.R: 38: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_predictive_metric.R: 39: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: })(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))40: (function (path, shuffle) {
> test_loo_predictive_metric.R: 41: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) asNamespace("testthat")$queue_task(path, shuffle) args <- lapply(args, enquote)})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE)) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: 41: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) }), base::quote(list("test_loo_predictive_metric.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_predictive_metric.R: 42: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395658db79c2"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_predictive_metric.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE)) quote = TRUE)
> test_loo_predictive_metric.R: 43: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395658db79c2"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21",
> test_loo_predictive_metric.R: compress = FALSE)42:
> test_loo_predictive_metric.R: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395658db79c2"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_predictive_metric.R: 43: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395658db79c2"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, 44: quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", base::withCallingHandlers({ compress = FALSE) {
> test_loo_predictive_metric.R: NULL44: NULLbase::withCallingHandlers({ } { base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395658db79c2"), NULL base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, NULL quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", } compress = FALSE) base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395658db79c2"), base::flush(base::stdout()) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, base::flush(base::stderr()) quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", { compress = FALSE) NULL base::flush(base::stdout())
> test_loo_predictive_metric.R: NULL base::flush(base::stderr()) } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err { NULL NULL } base::invisible()}, error = function(e) { { if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) callr_data <- base::as.environment("tools:callr")$`__callr_data__` } err <- callr_data$err e <- err$process_call(e) if (FALSE) { e2 <- err$new_error("error in callr subprocess") base::assign(".Traceback", base::.traceback(4), envir = callr_data) class <- base::class utils::dump.frames("__callr_dump__") class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", ".error")) } err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv)}, interrupt = function(e) { } { e <- err$process_call(e) callr_data <- base::as.environment("tools:callr")$`__callr_data__` e2 <- err$new_error("error in callr subprocess") err <- callr_data$err class <- base::class if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } class(e2) <- base::c("callr_remote_error", class(e2)) e <- err$process_call(e) e2 <- err$add_trace_back(e2) e2 <- err$new_error("error in callr subprocess") cut <- base::which(e2$trace$scope == "global")[1] class <- base::class if (!base::is.na(cut)) { class(e2) <- base::c("callr_remote_error", class(e2)) e2$trace <- e2$trace[-(1:cut), ] e2 <- err$add_trace_back(e2) } cut <- base::which(e2$trace$scope == "global")[1] if (callr_data$has_otel) { if (!base::is.na(cut)) { callr_data$otel_span$record_exception(e2) e2$trace <- e2$trace[-(1:cut), ] } } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", ".error")) }}, callr_message = function(e) { } base::try({ msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, callr_data <- base::as.environment("tools:callr")$`__callr_data__` NULL))) pxlib <- callr_data$pxlib data <- base::paste0(e$code, " ", base::nchar(msg), "\n", if (base::is.null(e$code)) { msg) e$code <- "301" if (callr_data$has_otel) { } callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}) pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") }
> test_loo_predictive_metric.R: })45: })doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 45: 46: doTryCatch(return(expr), name, parentenv, handler)tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 46: 47: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 47: 48: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 48: 49: doTryCatch(return(expr), name, parentenv, handler)tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
> test_loo_predictive_metric.R: names[nh], parentenv, handlers[[nh]])49:
> test_loo_predictive_metric.R: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), 50: names[nh], parentenv, handlers[[nh]])tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 50: 51: tryCatchList(expr, classes, parentenv, handlers)base::tryCatch(base::withCallingHandlers({
> test_loo_predictive_metric.R: {51: NULLbase::tryCatch(base::withCallingHandlers({ NULL { } NULL base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395658db79c2"), NULL base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, } quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-fun-1395658db79c2"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", compress = FALSE) compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible() base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) {
> test_loo_predictive_metric.R: }, error = function(e) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err utils::dump.frames("__callr_dump__") if (FALSE) { base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::assign(".Traceback", base::.traceback(4), envir = callr_data) envir = callr_data) utils::dump.frames("__callr_dump__") base::rm("__callr_dump__", envir = .GlobalEnv) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, } envir = callr_data) e <- err$process_call(e) base::rm("__callr_dump__", envir = .GlobalEnv) e2 <- err$new_error("error in callr subprocess") } class <- base::class e <- err$process_call(e) class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$new_error("error in callr subprocess") e2 <- err$add_trace_back(e2) class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", callr_data$otel_span$record_exception(e2) ".error")) } } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, }, interrupt = function(e) { envir = callr_data) { base::rm("__callr_dump__", envir = .GlobalEnv) callr_data <- base::as.environment("tools:callr")$`__callr_data__` } err <- callr_data$err e <- err$process_call(e) if (FALSE) { e2 <- err$new_error("error in callr subprocess") base::assign(".Traceback", base::.traceback(4), envir = callr_data) class <- base::class utils::dump.frames("__callr_dump__") class(e2) <- base::c("callr_remote_error", class(e2)) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, e2 <- err$add_trace_back(e2) envir = callr_data) cut <- base::which(e2$trace$scope == "global")[1] base::rm("__callr_dump__", envir = .GlobalEnv) if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] e <- err$process_call(e) } e2 <- err$new_error("error in callr subprocess") if (callr_data$has_otel) { class <- base::class callr_data$otel_span$record_exception(e2) class(e2) <- base::c("callr_remote_error", class(e2)) } e2 <- err$add_trace_back(e2) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", ".error")) }}, callr_message = function(e) { cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpe3ZVii/callr-rs-result-139563116dd21", base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) ".error")) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", } msg)}, callr_message = function(e) { if (callr_data$has_otel) { base::try({ callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") callr_data <- base::as.environment("tools:callr")$`__callr_data__` } pxlib <- callr_data$pxlib else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { if (base::is.null(e$code)) { base::invokeRestart("muffleMessage") e$code <- "301" } } }) msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, }), error = function(e) { NULL))) { data <- base::paste0(e$code, " ", base::nchar(msg), "\n", NULL msg) NULL if (callr_data$has_otel) { } callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) if (FALSE) { } base::try(base::stop(e)) pxlib$write_fd(3L, data) } if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { if (FALSE) { base::invokeRestart("cli_message_handled") base::q(save = "no", status = 1) } } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invisible() base::invokeRestart("muffleMessage")}, interrupt = function(e) { } { }) NULL}), error = function(e) { NULL { } NULL if (FALSE) { NULL base::q(save = "no", status = 1) } } if (FALSE) { base::invisible() base::try(base::stop(e))}) }
> test_loo_predictive_metric.R: if (FALSE) {An irrecoverable exception occurred. R is aborting now ...
> test_loo_predictive_metric.R: base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_predictive_metric-4.R
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (32): 'test_loo_subsampling_cases.R:4:3',
'test_loo_subsampling_cases.R:256:3', 'test_E_loo.R:134:1',
'test_E_loo.R:142:1', 'test_compare.R:91:1', 'test_compare.R:122:1',
'test_compare.R:160:1', 'test_crps.R:27:1',
'test_deprecated_extractors.R:8:1', 'test_deprecated_extractors.R:106:1',
'test_gpdfit.R:1:1', 'test_kfold_helpers.R:139:1',
'test_loo_and_waic.R:23:1', 'test_loo_moment_matching.R:157:1',
'test_loo_moment_matching.R:247:1', 'test_loo_moment_matching.R:365:1',
'test_model_weighting.R:69:1', 'test_print_plot.R:41:1',
'test_print_plot.R:45:1', 'test_print_plot.R:151:1',
'test_print_plot.R:169:1', 'test_print_plot.R:175:1',
'test_print_plot.R:181:1', 'test_psis.R:13:1', 'test_psis.R:39:1',
'test_psislw.R:15:1', 'test_relative_eff.R:7:1', 'test_relative_eff.R:43:3',
'test_loo_subsampling.R:896:3', 'test_loo_subsampling.R:1077:3',
'test_tisis.R:76:1', 'test_tisis.R:213:1'
• Sys.info()[["sysname"]] == "Darwin" && R.version$arch == "aarch64" is TRUE
(2): 'test_loo_moment_matching.R:468:3', 'test_psis.R:157:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_loo_and_waic.R:30:3'): loo with cores=1 and cores=2 gives same results ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─base::suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) at test_loo_and_waic.R:30:3
2. │ └─base::withCallingHandlers(...)
3. ├─loo::loo(LLarr, r_eff = r_eff_arr, cores = 2)
4. └─loo::loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
5. └─loo:::importance_sampling.array(...)
6. └─loo:::do_importance_sampling(...)
7. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
8. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
── Error ('test_loo_predictive_metric.R:4:1'): (code run outside of `test_that()`) ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─loo::psis(-LL, r_eff = r_eff, cores = 2) at test_loo_predictive_metric.R:4:1
2. └─loo:::psis.matrix(-LL, r_eff = r_eff, cores = 2)
3. └─loo:::importance_sampling.matrix(...)
4. └─loo:::do_importance_sampling(...)
5. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
6. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64