Last updated on 2026-08-02 19:49:07 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-gcc | 0.3.0 | 1.78 | 22.28 | 24.06 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.3.0 | 42.26 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.0 | 20.21 | OK | |||
| r-devel-windows-x86_64 | 0.3.0 | 8.00 | 67.00 | 75.00 | OK | |
| r-release-linux-x86_64 | 0.3.0 | 1.92 | 24.85 | 26.77 | ERROR | |
| r-release-macos-arm64 | 0.3.0 | 1.00 | 11.00 | 12.00 | OK | |
| r-release-macos-x86_64 | 0.3.0 | 2.00 | 46.00 | 48.00 | OK | |
| r-release-windows-x86_64 | 0.3.0 | 7.00 | 72.00 | 79.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.0 | 1.00 | 14.00 | 15.00 | OK | |
| r-oldrel-macos-x86_64 | 0.3.0 | 2.00 | 49.00 | 51.00 | OK | |
| r-oldrel-windows-x86_64 | 0.3.0 | 7.00 | 60.00 | 67.00 | OK |
Version: 0.3.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biocharkitgui)
>
> test_check("biocharkitgui")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-report.R:41:3'): gui_render_report renders a real HTML file from a populated store ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(store, out) at test-report.R:41:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
── Error ('test-report.R:58:3'): gui_render_report handles an entirely empty store gracefully ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(empty_store, out) at test-report.R:58:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.0
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0y5aKz’ ‘~/tmp/scratch/Rtmp1DsPp8’
‘~/tmp/scratch/Rtmp1tAzrH’ ‘~/tmp/scratch/Rtmp1u9PqU’
‘~/tmp/scratch/Rtmp2DTpuD’ ‘~/tmp/scratch/Rtmp2SvbaU’
‘~/tmp/scratch/Rtmp45TY4a’ ‘~/tmp/scratch/Rtmp537bZN’
‘~/tmp/scratch/Rtmp6f4w8N’ ‘~/tmp/scratch/Rtmp6xrDdN’
‘~/tmp/scratch/Rtmp7IWzFg’ ‘~/tmp/scratch/Rtmp7vJmVO’
‘~/tmp/scratch/Rtmp8O9pmN’ ‘~/tmp/scratch/Rtmp957NDE’
‘~/tmp/scratch/Rtmp9mTk2i’ ‘~/tmp/scratch/RtmpA5Roak’
‘~/tmp/scratch/RtmpA6PJdG’ ‘~/tmp/scratch/RtmpA7BwKR’
‘~/tmp/scratch/RtmpAE7Afz’ ‘~/tmp/scratch/RtmpAj6iBL’
‘~/tmp/scratch/RtmpB8itfO’ ‘~/tmp/scratch/RtmpBLqxj2’
‘~/tmp/scratch/RtmpCKIk5b’ ‘~/tmp/scratch/RtmpD3eBnZ’
‘~/tmp/scratch/RtmpDWXIWG’ ‘~/tmp/scratch/RtmpDXFAtq’
‘~/tmp/scratch/RtmpE4fLgO’ ‘~/tmp/scratch/RtmpEHdrtO’
‘~/tmp/scratch/RtmpFiIz9t’ ‘~/tmp/scratch/RtmpGHU07v’
‘~/tmp/scratch/RtmpGoG1kg’ ‘~/tmp/scratch/RtmpH5zkXY’
‘~/tmp/scratch/RtmpHCjr7u’ ‘~/tmp/scratch/RtmpIcMx53’
‘~/tmp/scratch/RtmpIuTdA0’ ‘~/tmp/scratch/RtmpJWFrlp’
‘~/tmp/scratch/RtmpKeEfV0’ ‘~/tmp/scratch/RtmpKev4zy’
‘~/tmp/scratch/RtmpLRzWLP’ ‘~/tmp/scratch/RtmpLWMzq1’
‘~/tmp/scratch/RtmpLacdMK’ ‘~/tmp/scratch/RtmpM35CE2’
‘~/tmp/scratch/RtmpNDBdKq’ ‘~/tmp/scratch/RtmpNbkrNU’
‘~/tmp/scratch/RtmpO142qW’ ‘~/tmp/scratch/RtmpP29si7’
‘~/tmp/scratch/RtmpP4dFmj’ ‘~/tmp/scratch/RtmpPTX2Lr’
‘~/tmp/scratch/RtmpPYVsPt’ ‘~/tmp/scratch/RtmpQ3oODQ’
‘~/tmp/scratch/RtmpQDAP73’ ‘~/tmp/scratch/RtmpQxjPWG’
‘~/tmp/scratch/RtmpR7mfvB’ ‘~/tmp/scratch/RtmpRSun50’
‘~/tmp/scratch/RtmpRWJV0C’ ‘~/tmp/scratch/RtmpT3vYkK’
‘~/tmp/scratch/RtmpTgtkYT’ ‘~/tmp/scratch/RtmpU0ByYD’
‘~/tmp/scratch/RtmpUHBHUE’ ‘~/tmp/scratch/RtmpUUTQxj’
‘~/tmp/scratch/RtmpUaifnp’ ‘~/tmp/scratch/RtmpV176od’
‘~/tmp/scratch/RtmpVdJKJX’ ‘~/tmp/scratch/RtmpVpKTxn’
‘~/tmp/scratch/RtmpWfqmK8’ ‘~/tmp/scratch/RtmpWxLdCj’
‘~/tmp/scratch/RtmpX6Mrc4’ ‘~/tmp/scratch/RtmpY5HQ4F’
‘~/tmp/scratch/RtmpZYHoo1’ ‘~/tmp/scratch/Rtmpa8X0ks’
‘~/tmp/scratch/RtmpcEu2JF’ ‘~/tmp/scratch/RtmpcOhYRn’
‘~/tmp/scratch/RtmpdnAH1R’ ‘~/tmp/scratch/RtmpdtSQQ9’
‘~/tmp/scratch/Rtmpf92R6U’ ‘~/tmp/scratch/Rtmpge2rFd’
‘~/tmp/scratch/RtmphKVKJI’ ‘~/tmp/scratch/RtmphNmgjz’
‘~/tmp/scratch/RtmpiGDOeh’ ‘~/tmp/scratch/RtmpiSGRkx’
‘~/tmp/scratch/RtmpjAnyd5’ ‘~/tmp/scratch/RtmpjBdhpw’
‘~/tmp/scratch/RtmpkD30cJ’ ‘~/tmp/scratch/Rtmpl4lV8V’
‘~/tmp/scratch/RtmplNHjYF’ ‘~/tmp/scratch/RtmplWexhT’
‘~/tmp/scratch/Rtmpm5Ir1e’ ‘~/tmp/scratch/Rtmpm5nnx0’
‘~/tmp/scratch/RtmpmO2Urf’ ‘~/tmp/scratch/RtmpnVFEKb’
‘~/tmp/scratch/RtmpnWdxAy’ ‘~/tmp/scratch/RtmpoL6aRE’
‘~/tmp/scratch/RtmpoaGMBv’ ‘~/tmp/scratch/RtmppeGSoD’
‘~/tmp/scratch/Rtmpqa9MRW’ ‘~/tmp/scratch/RtmprxapVk’
‘~/tmp/scratch/Rtmps57rZ7’ ‘~/tmp/scratch/RtmpsEdpee’
‘~/tmp/scratch/RtmpsGf7DD’ ‘~/tmp/scratch/RtmpspcQdK’
‘~/tmp/scratch/RtmpuYG86l’ ‘~/tmp/scratch/Rtmpv11NlG’
‘~/tmp/scratch/RtmpwLq3aW’ ‘~/tmp/scratch/RtmpwyK2V1’
‘~/tmp/scratch/Rtmpys459z’ ‘~/tmp/scratch/RtmpzoRbB3’
‘~/tmp/scratch/xvfb-run.1oXgJu’ ‘~/tmp/scratch/xvfb-run.1wY1x0’
‘~/tmp/scratch/xvfb-run.2GjhDY’ ‘~/tmp/scratch/xvfb-run.4B7dXq’
‘~/tmp/scratch/xvfb-run.7BcIfY’ ‘~/tmp/scratch/xvfb-run.8VGkLu’
‘~/tmp/scratch/xvfb-run.ADXlmn’ ‘~/tmp/scratch/xvfb-run.CVfflr’
‘~/tmp/scratch/xvfb-run.EECdri’ ‘~/tmp/scratch/xvfb-run.GmBSGd’
‘~/tmp/scratch/xvfb-run.KKjLeN’ ‘~/tmp/scratch/xvfb-run.Okwqs4’
‘~/tmp/scratch/xvfb-run.QX4Ebi’ ‘~/tmp/scratch/xvfb-run.Rlxbb4’
‘~/tmp/scratch/xvfb-run.TkssLK’ ‘~/tmp/scratch/xvfb-run.XT46HJ’
‘~/tmp/scratch/xvfb-run.ZBKVya’ ‘~/tmp/scratch/xvfb-run.aBdNo5’
‘~/tmp/scratch/xvfb-run.aJQhq2’ ‘~/tmp/scratch/xvfb-run.cni8J1’
‘~/tmp/scratch/xvfb-run.gCKNMe’ ‘~/tmp/scratch/xvfb-run.hNaF1l’
‘~/tmp/scratch/xvfb-run.i5v15E’ ‘~/tmp/scratch/xvfb-run.iZragB’
‘~/tmp/scratch/xvfb-run.oMsXtb’ ‘~/tmp/scratch/xvfb-run.pDJxUs’
‘~/tmp/scratch/xvfb-run.pNbRKG’ ‘~/tmp/scratch/xvfb-run.t3CS57’
‘~/tmp/scratch/xvfb-run.uCbL7X’ ‘~/tmp/scratch/xvfb-run.vUiLi1’
‘~/tmp/scratch/xvfb-run.wCMBBu’ ‘~/tmp/scratch/xvfb-run.xKujGR’
‘~/tmp/scratch/xvfb-run.xymqpz’ ‘~/tmp/scratch/xvfb-run.ycKWkV’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/4s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biocharkitgui)
>
> test_check("biocharkitgui")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-report.R:41:3'): gui_render_report renders a real HTML file from a populated store ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(store, out) at test-report.R:41:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
── Error ('test-report.R:58:3'): gui_render_report handles an entirely empty store gracefully ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(empty_store, out) at test-report.R:58:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64