d9fc5a4cf0634a6482947732f9a07351 *DESCRIPTION
a7c8e2113bc0b116a4a60d99f6e5ca54 *NAMESPACE
12b6587e395dea5e48efb6c6f9495487 *NEWS
325a4cf40cde984e653128752c403f52 *R/BSWiMS.r
ec1cbd3367f19ed74298bd91ee3bd2a7 *R/CoxBenchmark.R
81619cc13d2e1f58012dfb20faa2f6f9 *R/EmpiricalSurvDiff.r
627a813d456ef91b3096a23cd212b063 *R/FRESA.Model.R
f3bb0d221d0ac84f1254b00c86b26c6f *R/FRESAModelingFunctions.R
0a771c40d15ee08f2c546218b4acf71e *R/FRESAScale.r
d6613f09da1ed0d15264632c87d8071f *R/ForwardSelection.Model.Bin.R
6c219f4a7071a99fd93ba84b3f94a751 *R/ForwardSelection.Model.Res.R
101987b96e08f139a5b9006ee11f5fea *R/GMVECluster.r
17595af20f93edb2fec27042d041fb30 *R/IterativeDecorrelation.r
b604f1d803550becd6e3ca200cc25631 *R/OrdinalBenchmark.R
354e59d6aca1547631bb131e75f0fefc *R/PoissonEventRiskCalibration.R
3091540398734d63b72ef5fb4e574aec *R/RRPlot.R
5012a43f1e93a39c36a25b0d44911c6e *R/RegresionBenchmark.R
b500532a35925b4ecfa9ae23cde0bac6 *R/backVarElimination.Bin.R
a564f6d8bbbe03a574b8456db9efd663 *R/backVarElimination.Res.R
c575623c0dca6c2371d4d6f402824e31 *R/baggedModel.R
bd542e6c77ab911a691f8774f6a5b378 *R/baggedModelS.R
c4bc5b7a39d0bf7c30c3947e4a0edb6d *R/barPlotCiError.R
7d8033ede06a56f00ac39b053c08993d *R/binaryBenchMark.R
042e94456a85c762a384cce5e6e7ca21 *R/bootstrapValidation.Bin.R
1d22799b3608be81ed4f2df788d24f06 *R/bootstrapValidation.Res.R
e47ac5871e7934078ad1a299ab83b570 *R/bootstrapVarElimination.Bin.R
c241430020dce0b3b92c38f377aa2d27 *R/bootstrapVarElimination.Res.R
aa7177317cb60c38781c761523446278 *R/crossValidationFeatureSelection.Bin.R
e64440616e96b815bff6b1cfe4b56582 *R/crossValidationFeatureSelection.Res.R
3f0e5904bfcec3d440578314e2ddf871 *R/ensemblePredict.R
b20964911201f611b442ae864b004e5f *R/featureAdjustment.R
e193e80bb7856ef83f774b4c6f0e5824 *R/getKNNpredictionFromFormula.R
b6e08410ca8b01b3bf0ef7fe29c3f58e *R/getMedianCalibratedPrediction.R
ab97f5072005e35c3f54c83c90674aee *R/getSignature.r
ec8a61923e0426906188987d4bc9cc37 *R/getVar.Bin.R
b58d9ee94b68b8d32c7bfcc230cff573 *R/getVar.Res.R
c19a151bfeffa75fdf8ef7c17a2214fd *R/heatMaps.R
efb7c1b16ae1ebd6353ce93cc732672b *R/improvedResiduals.R
fcae9839707f59bee3a93209fd1e7c8e *R/isoData.r
d0281fc217e3271f82bccb8a2a673d15 *R/jaccard.r
952e106fe57256e1fa8464750ee25a30 *R/listTopCorrelatedVariables.R
a4602bdcec6185248079cfc01fbbbde5 *R/modelFitting.R
af6f1d9589697a7073ae353961c4b521 *R/nearestCentroid.r
14683bca5fa62cd833046c1cf693bf34 *R/nearestneighborimpute.R
525b15b5806d54dd10917cc155cbc2ef *R/orderFeatures.r
b7b15567b2736ead858af4de53af9d81 *R/plot.FRESABenchmark.R
ead46476b663ca76f6acefdc8c39bfd7 *R/plot.bootstrapValidation.Bin.R
740b51523ea6d623c411a358a27eaf86 *R/plot.bootstrapValidation.Res.R
4f814695018dda5d60ae4849eef89e58 *R/plotModels.ROC.R
3b1b8f2fad018fbc90d4cdd12c810f52 *R/predictForFresa.R
9f20031bbf8c9fa379cbc31a32e1e2aa *R/predictionStats.R
98bb13dfea4ab0f6c1cd5aae862c5552 *R/randomCV.R
2536190a46f7c15930903d2dd1c318cb *R/randomCVFunctions.R
7af7ed9d9f808a86992ba9732af5b583 *R/rankInverseNormalDataFrame.R
512ef69686541258180545d5733c6ae3 *R/reportEquivalentVariables.R
85bfa74a38d4fca0368d12e7e6e9265b *R/residualtForFRESA.R
e8c3f0b8129340f29114db97d89e2a69 *R/rpredict.R
0288417626553e499c80e3fea70d2830 *R/signatureDistance.r
fc25774c0f5a9ab9ce3412c7a672b6e4 *R/summary.bootstrapValidation.R
40e3f43d4da5c8ae576baa5663aaeba7 *R/summary.fitFRESA.R
67bb7699c509ca894f0b3aa8e31fa8ec *R/summaryReport.R
147afd6e55b711fe95d1162b238e0774 *R/timeSerieAnalysis.R
ca46b3610494e333edeeb1340f9411d3 *R/uniRankVar.R
b2a8940b737295088448832b072b33d1 *R/univariateCox.R
10092d74257ce83ce5b9a65f76d1345e *R/univariateRankVariables.R
1dd89e4a909fcbc7f9c623dc26f4712b *R/update.uniRankVar.R
8a7b55e48051f00a7652e3819f72117c *R/updateModel.Bin.R
2dacb68d0a510fb1d9590b8cf0e2dd09 *R/updateModel.Res.R
7b9bfb71082aa5ba07f0810f289f1c71 *README.md
86947be1be6b4ac083f7b246a7fbb082 *data/cancerVarNames.rda
f2bb8e765b0041a85da048048875bd9d *inst/CITATION
50d317d748cbdd597e8654e179b4abc8 *inst/doc/CVMethods_totorial.pdf
c9c01c1857778cbeda3bf142dd9cd865 *inst/doc/FeatureSelectionBSWiMSMethod.pdf
9c2e3786e0aa050f4dae8b81a5733b0b *inst/doc/VignetteFRESABenchmark.pdf
56d272460d67a556a169a09d6c3d32f7 *man/BESS.Rd
2e6dd2ef1a09c92573a0947b50460a04 *man/BSWiMS.Rd
15269d143e4550755a45ac5ee69a245f *man/CV_signature.Rd
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3779e0d736d325cfb3b7f2db471558be *man/ClustClass.Rd
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01647cff96b8f52affe660d16d5337e1 *man/EmpiricalSurvDiff.Rd
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05a1ed0f2f63f358610101d375986747 *man/FRESA.Model.Rd
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5a7876f31d849361231c9c8e32a29f1c *man/FilterMultivariate.Rd
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ea5c6c998fb62cab9e43e0b77b955401 *man/ForwardModel.Res.Rd
4ad3341aff2be4bd00b883dad3346954 *man/GMVEBSWiMS.Rd
4a1df3619e899e1a820c00e9b8ac9aad *man/GMVECluster.Rd
812b8a9e7a4d713701af0b80db456772 *man/HCLAS_KNN_CLASS.Rd
351977067e81db4554a42d42a0374db9 *man/IterartiveDecorrelation.Rd
53f3207c22a3493776fc5607351da234 *man/KNN_method.Rd
26f79d0de2870ea61dd24d4da584fb83 *man/LASSO_MIN.Rd
25a3308b974489b6f0af76f172a2efac *man/LM_RIDGE_MIN.Rd
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7ff52d509735e35969ef35a44ea2edb2 *man/baggedModel.Rd
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95632857ed91e88346f87348d768c22e *man/benchmarking.Rd
31c462da9e44ef7033ef9f564ccb2717 *man/bootstrapValidation.Bin.Rd
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3e4644f3aa6cf4c5eab9cd681eedf3ef *man/bootstrapVarElimination.Bin.Rd
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7e026e975b662fa5284c562ca0648b0d *man/calBinProb.Rd
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5670c8af35678511681c3807b432dec2 *man/crossValidationFeatureSelection.Bin.Rd
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2c9a151b928b4e658111ec63aaabc075 *man/filteredFit.Rd
9da696d1b881934486348e13638e37ad *man/getDerivedCoefficients.Rd
0b85c22cbc584cf3cd7d720b382b108c *man/getKNNpredictionFromFormula.Rd
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aabbc0f352e60069aeacc0ac5f3b3e45 *man/getVar.Bin.Rd
80681fabd4aa950adad94eb6d19be57a *man/getVar.Res.Rd
a5a3613bc8a01b3f3c5dfe5f15795380 *man/heatMaps.Rd
285b351af0b23a353a4bac5ac3d4af36 *man/improvedResiduals.Rd
5d1c75f6ae8daf72eb5302db66623b74 *man/jaccardMatrix.Rd
e67f307e2da55800d3208d3482f50446 *man/listTopCorrelatedVariables.Rd
e3ef06d4332f79720340e326fb624dd5 *man/modelFitting.Rd
7bc30fd57da783f2de4abeb3f3bdc378 *man/nearestCentroid.Rd
4c2bf491143865a4c411a3af59018be1 *man/nearestneighborimpute.Rd
595a16eb0b3dc3677152f9d5880c7239 *man/plot.FRESABenchmark.Rd
5ff70f2b47307c8a3a37761c6956c1e2 *man/plot.bootstrapValidation.Bin.Rd
39a3610a57c1ac48fb86cdc9b5f3f679 *man/plot.bootstrapValidation.Res.Rd
bf4ecc52207e9c5df78e7301b490bb63 *man/plotModels.ROC.Rd
73ee1a02ceb9f8c2522f16a4d92f6fdf *man/poissonProbs.Rd
fb48eef39332f8b1ffb6f87ea1ebc3b9 *man/predict.BAGGS.Rd
804e455d837005e3f5ebc7ffd98a5af6 *man/predict.CLUSTER_CLASS.Rd
8299f26a08b4cff4d32ac89b4a7b4f0d *man/predict.FRESAKNN.Rd
edfc29adf3842df216591b3a33372113 *man/predict.FRESA_BOOST.Rd
8c427642811637e7c769227b72e56157 *man/predict.FRESA_FILTERFIT.Rd
2ead830ff91e23fbe839052904e60ef1 *man/predict.FRESA_LASSO.Rd
b4348bb5fb7360ab44377c139f2ba8e5 *man/predict.FRESA_NAIVEBAYES.Rd
1738d8cd611ac4b560e17aa398614047 *man/predict.FRESA_RIDGE.Rd
a70dd38be48b7402e2aad3df65cc0397 *man/predict.FRESA_SVM.Rd
a845553f3f90a94760556ff6ebecc345 *man/predict.FRESAsignature.Rd
41084e009d23a2ba806fbd235889970f *man/predict.GMVE.Rd
102ce84cc6abc122d8a4ccc8d3c27350 *man/predict.GMVE_BSWiMS.Rd
3f41e0458b827c24497aa64e6fcc3fdf *man/predict.LogitCalPred.Rd
5a4fc0f668c393be106e5f4ddef555e6 *man/predict.bess.Rd
7c76e062afad87e7962ac6bd979e34b7 *man/predictForFresa.Rd
c423d64eec04a4c79fecef98d2c3c3b1 *man/predictionStats.Rd
7b0d3d0cf40fc26dd95d1ee6da2dd756 *man/randomCV.Rd
ca7d270a8afb9a2c10342568d0a98a7a *man/rankInverseNormalDataFrame.Rd
00bf56823a8994bec78b1a8a768535ad *man/reportEquivalentVariables.Rd
ce63886fcbf089c78300925998f1a56b *man/residualForFRESA.Rd
06e10f1157f49b2a58ac9fbdb6200c80 *man/signatureDistance.Rd
98614391a5aa2733fc7aa1f0d6a2fc36 *man/summary.bootstrapValidation.Rd
3bb88bd8fb327eabc940852477ebd162 *man/summary.fitFRESA.Rd
0d37420155a1a0234f1c627e1b498cc3 *man/summaryReport.Rd
c62dbf7ba62a0f6e3ff054e3374d96ab *man/timeSeriesAnalysis.Rd
fab0452b295deec269b2f869ad7f0676 *man/trajectoriesPolyFeatures.Rd
ae3e53dd9b319902baae0e76cc72bd18 *man/uniRankVar.Rd
9f0343b2db0bcb8d6f622b0194bab26c *man/univariateRankVariables.Rd
a398f368093a1f43941b928ec94c5cc9 *man/update.uniRankVar.Rd
61819f600d16aebb79b0d8a2e422736b *man/updateModel.Bin.Rd
7e7c002a6aa763167e42ad568e3d6329 *man/updateModel.Res.Rd
604f29e48f84d413c093535304814c4d *src/FRESACAD_init.cpp
2dae9bcdb0da4fbf9f487fa417272507 *src/FRESAcommons.cpp
9d959ead58e5f211ca9bc291a2d0e85e *src/FRESAcommons.h
e558034552c4b69d8ff9136b4924ef3d *src/Makevars
a384dd1dab549cbda6328f58cc188a64 *src/Makevars.win
b55765a75b04893988643c6e8bdfd516 *src/binaryFeatureSelectionCpp.cpp
c1bfc696919a813854e9d8d692becee7 *src/rankInverseNormalCpp.cpp
6500d52da561a98737a269b5b27552dd *src/regresionFeatureSelectionCpp.cpp
