# Inference of Gene Regulatory Networks

## Documentation for package ‘corto’ version 1.3.1

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS

## Help Pages

barplot2 | barplot2 - Bar plot with upper error bars
corto | Calculate a regulon from a data matrix
fcor | A fast correlation function
filter_regulon | filter_regulon - Filter a Regulon Object
fisherp | Fisher integration of p-values
getregulon | getregulon - Flatten a Regulon Object into a Table
gsea | GSEA
gsea2 | 2-way GSEA GSEA Gene set enrichment analysis of two complementary gene sets using gsea
kmgformat | kmgformat - Nice Formatting of Numbers
mra | Perform Master Regulator Analysis (mra).
mraplot | Plot a master regulator analysis
p2r | p2r Convert a P-value to the corresponding Correlation Coefficient
p2z | p2z
plot_gsea | Plot GSEA results
plot_gsea2 | Plot 2-way GSEA results
r2p | r2p Convert Correlation Coefficient to P-value
scatter | scatter - XY scatter plot with extra information
scinot | scinot - Convert a number to a scientific notation expression
slice | Slice
ssgsea | ssGSEA
stouffer | Stouffer integration of Z scores
textrepel | textrepel - Plot text with non-overlapping labels
val2col | val2col - Convert a numeric vector into colors
wstouffer | Weighted Stouffer integration of Z scores
z2p | z2p