ENMdetails-class        ENMdetails class
ENMeval-package         Automated runs and evaluations of ecological
                        niche models
ENMevaluate             Tune ecological niche model (ENM) settings and
                        calculate evaluation statistics
ENMevaluation-class     ENMevaluation class
ENMevaluation_convert   Convert old ENMevaluation objects to new ones
ENMnull-class           ENMnull class
ENMnulls                Generate null ecological niche models (ENMs)
                        and compare null with empirical performance
                        metrics
aic.maxent              Calculate AICc from Maxent model prediction
buildRMM                Build metadata object from ENMeval results
bvariegatus             Example occurrence dataset.
calc.10p.trainThresh    Calculate 10 percentile threshold
calc.niche.overlap      Calculate Similarity of ENMs in Geographic
                        Space
clamp.vars              Clamp predictor variables
corrected.var           Corrected variance function
emp.bg                  emp.bg generic for ENMnull object
emp.bg.grp              emp.bg.grp generic for ENMnull object
emp.occs                emp.occs generic for ENMnull object
emp.occs.grp            emp.occs.grp generic for ENMnull object
enm.args                enm.args generic for ENMdetails object
enm.bioclim             ENMdetails bioclim
enm.errors              enm.errors generic for ENMdetails object
enm.fun                 enm.fun generic for ENMdetails object
enm.maxent.jar          ENMdetails maxent.jar
enm.maxnet              ENMdetails maxnet
enm.msgs                enm.msgs generic for ENMdetails object
enm.name                eval.name generic for ENMdetails object
enm.ncoefs              enm.ncoefs generic for ENMdetails object
enm.predict             enm.predict generic for ENMdetails object
enm.variable.importance
                        enm.variable.importance generic for ENMdetails
                        object
enmeval_results         Example ENMevaluation object.
eval.algorithm          eval.algorithm generic for ENMevaluation object
eval.bg                 eval.bg generic for ENMevaluation object
eval.bg.grp             eval.bg.grp generic for ENMevaluation object
eval.clamp.directions   eval.clamp.directions generic for ENMevaluation
                        object
eval.doClamp            eval.doClamp generic for ENMevaluation object
eval.models             eval.models generic for ENMevaluation object
eval.occs               eval.occs generic for ENMevaluation object
eval.occs.grp           eval.occs.grp generic for ENMevaluation object
eval.occs.testing       eval.occs.testing generic for ENMevaluation
                        object
eval.other.settings     eval.other.settings generic for ENMevaluation
                        object
eval.overlap            eval.overlap generic for ENMevaluation object
eval.partition.method   eval.partition.method generic for ENMevaluation
                        object
eval.partition.settings
                        eval.partition.settings generic for
                        ENMevaluation object
eval.predictions        eval.predictions generic for ENMevaluation
                        object
eval.results            eval.results generic for ENMevaluation object
eval.results.partitions
                        eval.results.partitions generic for
                        ENMevaluation object
eval.rmm                eval.rmm generic for ENMevaluation object
eval.taxon.name         eval.taxon.name generic for ENMevaluation
                        object
eval.tune.settings      eval.tune.settings generic for ENMevaluation
                        object
eval.variable.importance
                        eval.variable.importance (variable importance)
                        generic for ENMevaluation object
evalplot.envSim.hist    Similarity histogram plots for partition groups
evalplot.envSim.map     Similarity maps for partition groups
evalplot.grps           Partition group plots
evalplot.nulls          ENMnulls statistics plot
evalplot.stats          ENMevaluation statistics plot
loadENMevaluation       Load ENMevaluation object
lookup.enm              Look up ENMdetails abject
maxentJARversion        Look up version of maxent.jar
maxnet.predictRaster    Predict raster for maxnet
null.algorithm          null.algorithm generic for ENMnull object
null.doClamp            null.doClamp generic for ENMnull object
null.emp.results        null.emp.results generic for ENMnull object
null.mod.settings       null.mod.settings generic for ENMnull object
null.no.iter            null.no.iter generic for ENMnull object
null.other.settings     null.other.settings generic for ENMnull object
null.partition.method   null.partition.method generic for ENMnull
                        object
null.partition.settings
                        null.partition.settings generic for ENMnull
                        object
null.results            null.results generic for ENMnull object
null.results.partitions
                        null.results.partitions generic for ENMnull
                        object
parse_lambdas           Parse Maxent lambdas information
partitions              Methods to partition data for evaluation
saveENMevaluation       Save ENMevaluation object
tune.enm                Iterate tuning of ENMs
