%>%                     Pipe operator
%T>%                    Tee operator
ArrayParameter-class    Array parameter prototype
Collection-class        Collection prototype
Constraint-class        Constraint prototype
Decision-class          Decision prototype
MiscParameter-class     Miscellaneous parameter prototype
Objective-class         Objective prototype
OptimizationProblem-class
                        Optimization problem class
OptimizationProblem-methods
                        Optimization problem methods
Parameter-class         Parameter class
Parameters-class        Parameters class
ProjectModifier-class   Conservation problem modifier prototype
ProjectProblem-class    Project problem class
ScalarParameter-class   Scalar parameter prototype
Solver-class            Solver prototype
Target-class            Target prototype
Weight-class            Weight prototype
action_names            Action names
add_absolute_targets    Add absolute targets
add_binary_decisions    Add binary decisions
add_default_solver      Add a default solver
add_feature_weights     Add feature weights
add_gurobi_solver       Add a 'Gurobi' solver
add_heuristic_solver    Add a heuristic solver
add_locked_in_constraints
                        Add locked in constraints
add_locked_out_constraints
                        Add locked out constraints
add_lpsolveapi_solver   Add a lp_solve solver with 'lpSolveAPI'
add_lsymphony_solver    Add a SYMPHONY solver with 'lpsymphony'
add_manual_locked_constraints
                        Add manually specified locked constraints
add_manual_targets      Add manual targets
add_max_phylo_div_objective
                        Add maximum phylogenetic diversity objective
add_max_richness_objective
                        Add maximum richness objective
add_max_targets_met_objective
                        Add maximum targets met objective
add_min_set_objective   Add minimum set objective
add_random_solver       Add a random solver
add_relative_targets    Add relative targets
add_rsymphony_solver    Add a SYMPHONY solver with 'Rsymphony'
array_parameters        Array parameters
as.Id                   Coerce object to another object
as.list.OptimizationProblem
                        Convert 'OptimizationProblem' to list
branch_matrix           Branch matrix
compile                 Compile a problem
constraints             Project prioritization problem constraints
decisions               Specify the type of decisions
feature_names           Feature names
is.Id                   Is it?
matrix_parameters       Matrix parameters
misc_parameter          Miscellaneous parameter
new_id                  Identifier
new_optimization_problem
                        Optimization problem
new_waiver              Waiver
number_of_actions       Number of actions
number_of_features      Number of features
number_of_projects      Number of projects
objectives              Problem objective
oppr                    oppr: Optimal Project Prioritization
parameters              Parameters
plot.ProjectProblem     Plot a solution to a project prioritization
                        problem
plot_feature_persistence
                        Plot a bar plot to visualize a project
                        prioritization
plot_phylo_persistence
                        Plot a phylogram to visualize a project
                        prioritization
pproto                  Create a new 'pproto' object
print                   Print
problem                 Project prioritization problem
project_cost_effectiveness
                        Project cost effectiveness
project_names           Project names
replacement_costs       Replacement cost
scalar_parameters       Scalar parameters
show                    Show
sim_data                Simulated data
simulate_ppp_data       Simulate data for the 'Project Prioritization
                        Protocol'
simulate_ptm_data       Simulate data for 'Priority threat management'
solution_statistics     Solution statistics
solve                   Solve
solvers                 Problem solvers
targets                 Targets
tibble-methods          Manipulate tibbles
weights                 Weights
