TITAN2                  Threshold Indicator Taxa Analysis
boot.titan              Controls the allocation of bootstrap replicates
env.part                Partitions environmental gradient for analysis
getivz                  Performs calculation of IndVal z scores from
                        observed and permuted values
glades.env              glades.env title
glades.taxa             glades.taxa title
glades.titan            glades.titan title
indval                  IndVal scores based on relative abundance
                        across, and occurrence frequency within, groups
indvalp                 Calculate permuted IndVal scores using a group
                        matrix
ivzsums                 Sum IndVal z scores across taxa
obs.summ                Summarizes results from TITAN's analaysis of
                        observed data
permiv                  Permutation of group membership for a single
                        candidate partition
plot-cps                Plots probability densities of empirical
                        distributions of bootstrapped change points
plot-sumz               Plots the pattern of community change along an
                        environmental gradient
plot-taxa               Plots taxon-specific change points
plot_sumz_density       Plot community level change
plot_taxa_ridges        Taxon change point ridge plots
smallBigBoot            Summarizes raw output from TITAN's bootstrap
                        procedure
sumz.tab                Summarizes the results of the community-level
                        sum(z) analysis
tboot                   Calculate bootstrapped IndVal z scores
titan                   Perform a threshold indicator taxa analysis
txa.screen              Screening of site by taxa matrix
